Last week, members of the emergency Committee declared an epidemic in DR Congo "emergency environment, public health, worldwide importance".
Aceng said Uganda is safe and all national and worldwide travelers are free to travel to and within the country.
"The granting of arrivals visas for people entering from DRC has been stopped, to conserve the wellbeing of pilgrims", the ministry's note said.
The epidemic has killed more than 1,700 people - more than two-thirds of those who contracted it - since it emerged last August, according to the DRC's health ministry.
"There are people who have been preparing for years, sometimes 10 to put together the $4,250 (£3,400) and make this divine trip to Mecca", he said.
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According to the International Health Regulations (IHR) 2005, movement of people from one place to another within the country and between countries is not restricted during disease outbreaks.
A vaccine by drugmaker Merck is being widely used in the affected provinces of Ituri and North Kivu.
World Health Organization also said the USA could bolster the battle against the virus by allowing more of its experts to travel to the outbreak zone. AHF recently donated thirty-thousand dollars' worth of medical supplies to Uganda to help protect medical staff in Western Uganda near the DRC border.
In its latest meeting, the AU Peace and Security Council deliberated on the outbreak of Ebola in the Eastern part of the DRC, whereby it called for urgent measures to control the disease and eliminate its spreading to other parts of the country or neighboring countries, said the statement.
"It is hard to fight a battle without your best ally at your side", Ryan told reporters when asked about CDC's deployment.
"But our colleagues in CDC have provided incredible support, both in Congo, in the surrounding countries, here in Geneva, in our operation centers in backstopping and providing high level technical assistance to the response", Ryan said.